Shiqi Xu

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contact: shiqixudev@gmail.com

I am currently an imaging algorithm scientist at Zeiss in California. My role is to design and develop scalable, deep learning-enabled algorithms for high-resolution volumetric image reconstruction.

Before joining Zeiss, I obtained my Ph.D. from Duke University under the supervision of Prof. Roarke Horstmeyer. During this time, I developed computational algorithms for novel sensor arrays to image moving objects with gigapixel resolution. I also hold an M.S. degree from Washington University, where I was supervised by Prof. Ulugbek Kamilov on compressive sensing, and Prof. Quing Zhu on medical imaging analysis for portable bedside devices.

Research Interests

  • I am interested in creating computational imaging technologies to help understand and digitize the world.
  • I am particularly fascinated by the microcosmos, where tiny structures invisible to the naked eye reside.

Research Expertises

  • Volumetric image reconstruction
  • High resolution optical and X-ray imaging system
  • Computational photography
  • Image processing and analysis (both AI and classic)

selected publications

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    Tensorial tomographic Fourier Ptychography with applications to muscle tissue imaging
    Shiqi Xu ,  Xi Yang ,  Paul Ritter ,  Xiang Dai ,  Kyung Chul Lee ,  Lucas Kreiss ,  Kevin C Zhou ,  Kanghyun Kim ,  Amey Chaware ,  Jadee Neff ,  and  others
    Advanced Photonics, 2024
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    Imaging Dynamics Beneath Turbid Media via Parallelized Single-Photon Detection
    Shiqi Xu ,  Xi Yang ,  Wenhui Liu ,  Joakim Jönsson ,  Ruobing Qian ,  Pavan Chandra Konda ,  Kevin C Zhou ,  Lucas Kreiß ,  Haoqian Wang ,  Qionghai Dai ,  and  others
    Advanced Science, 2022
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    Real-time colorectal cancer diagnosis using PR-OCT with deep learning
    Shiqi Xu ,  Yifeng Zeng ,  William C Chapman Jr ,  Shuying Li ,  Zahra Alipour ,  Heba Abdelal ,  Deyali Chatterjee ,  Matthew Mutch ,  and  Quing Zhu
    Theranostics, 2020